can i get fastq file on ncbi database or can i convert fasta ti fastq i need to run macrel, a antimicrobial peptide prediction pipeline from whole genome for my phd. can u plz help
You can get .fastq file from NCBI's SRA, ENA, or DDBJ. Or if you have got it sequenced you will get it from sequencing facility. Fasta file does not carry quality information therefore you cannot convert it to fastq.
Sir, I am writing research article there is a used of different software like VMir, MFold , Mature Bayes , miRBD , cytoscape , clueGO, CluePedia ,CytoKEGG, Reactome , MCODE etc.. Can help me how we use these software...
hello XploreBio. I love your classes. however, I am currently working on a paper that has something to do with RNA-seq data. I would love if you could be of help in anyway.. Thanks.
What kind of data you want to submit? Large data is submitted as fastq. gene or protein sequence as fasta. there are tools for converting fastq to fasta.
@@XploreBio thank you Sir, I have 16S rRNA sequence data (fastq format) from metagenomic DNA of four environmental samples, each samples containing 600 to 1000 spp. of bacteria.
this is amazing! thank you so much!very organized and clear
Thanks :)
Videos are very informative sir pl keep updating all of us with these information
Surely.. Thanks
excellent, slowing down the lecture will be highly beneficial
Thank you so much for such an informative video.
Hi sir
Your videos and the way u r representation is awsome superbbb
@Prasanth..Thanks..
Can you please upload more videos regarding NGS. It’s a very good explanation between these two file formats
Expecting more videos under bioinformatics topic sir.
so helpful thanks for making this!
Thanks 🙏🙏
I luv your channnel. Thanks for exists
I am glad you like them!
can i get fastq file on ncbi database or can i convert fasta ti fastq
i need to run macrel, a antimicrobial peptide prediction pipeline from whole genome for my phd.
can u plz help
You can get .fastq file from NCBI's SRA, ENA, or DDBJ. Or if you have got it sequenced you will get it from sequencing facility. Fasta file does not carry quality information therefore you cannot convert it to fastq.
Sir ,
Please make us understand about Transcriptomics data representation plots.
Sir, I am writing research article there is a used of different software like VMir, MFold , Mature Bayes , miRBD , cytoscape , clueGO, CluePedia ,CytoKEGG, Reactome , MCODE etc.. Can help me how we use these software...
Please write to me @
xplorebio@yahoo.com
hello XploreBio. I love your classes. however, I am currently working on a paper that has something to do with RNA-seq data. I would love if you could be of help in anyway.. Thanks.
Hi. thanks Ebenezer what kind of help do you need.
@@XploreBio may I have your email for proper information or anyway to communicate outside youtube...
Write to me @
xplorebio@yahoo.com
Dear Sir, Can I submit my sequence data to NCBI in FASTq Format? if no, How can I change my FASTq data to FASTA format?
What kind of data you want to submit? Large data is submitted as fastq. gene or protein sequence as fasta. there are tools for converting fastq to fasta.
This might help. www.biostars.org/p/85929/
@@XploreBio thank you Sir, I have 16S rRNA sequence data (fastq format) from metagenomic DNA of four environmental samples, each samples containing 600 to 1000 spp. of bacteria.
@@XploreBio thank you, Sir!