Bioinformatics practical 2 how to run NCBI BLAST

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This video will teach you how to run NCBI-BLAST and how to find similarities in sequences (protein or nucleotide) using BLAST tool of NCBI. Source of the article published in description is Wikipedia. I am sharing their material. Copyright by original content developers.
Link- en.wikipedia.or...

[@k.network8617]

I am SOOO in love with Shomu's Biology. This channel has helped me immensely with my degree❤❤❤. Way more than I could have thought. I'm so grateful 😊. THANK YOU!!!!!

[@ayeshamishaal3779]

THIS HELPED ME A LOT FOR MY PRESENTATION A BIG THANKS ACROSS THE BORDER....THANKU THANKU THANKU

[@shomusbiologyofficial]

Glad to hear that you're getting benefit from my lectures

[@zebriahpatiencezhuwao9002]

You're a hero! I salute you sir. Thank you

[@shomusbiologyofficial]

Thank you

[@hania.1220]

As always, you are the best! ❤️🇮🇷

[@shomusbiologyofficial]

Thank you so much for appreciating my efforts

[@subhradeepsarkar4825]

Thank u sir u r a saviour.....

[@bapaimallik5173]

At 17.15 minutes you are showing that the identity numbers of the human prion protein are different. The reason they are different is because the initial ID is the ID in the NCBI database whereas the second ID beginning with P is the ID in the Swiss prot database as expected because you are using Swiss Prot to search the database.

[@flutteringberret7327]

Thanks. very helpful for beginner like me

[@yuktanihalani]

Sir how to read the result like nos. OF BLAST HITS obtained and all

[@anjaliparashar8855]

the way of explaining is awsmmm....plz explain about perl also..

[@devikas8740]

Hello, is there an option like 'more titles' after we get blast results ? Is yes where is that located?

[@bakulverma8887]

Very helpful video....it really helped me in my assignment.....thank you ^_^

[@shomusbiologyofficial]

You're welcome

[@shomilverma3692]

Bhaiya mst pdhaya apne wowwwwwww

[@shomusbiologyofficial]

Thank you so much for appreciating my efforts

[@gauravmudgal841]

simply marvelous and understandable....

[@saritajata2781]

Sir app buhut aacha padate ho

[@shomusbiologyofficial]

Thank you

[@saadmuslim4455]

at 17:13, I think it was by mistake, the first accession number is not the accession of query sequence but it refers to the observed or obtained alignment results

[@papridas8979]

This is really helpful🙏

[@aregawiataklti2177]

Helpful and could you help me on primer design as follows. please help me how to design it
EXERCISE 13: Manual Design of Primers
1. Go to nucleotide database and pick a gene called protein kinase
2. Download more related nucleotide and protein sequences of your gene of interest
3. Multiple align; do the alignment similar sequence types together, why?
4. Design primers with a amplicon length 500bp onto conserved regions.
5. What do you think the practical implication of getting a primer from conserved regions?
6. Evaluate your primer of interst according good primer properties
7. Do you have any alternative method(s) to design primers using web tools?

[@mayamaya-ry3eg]

Aregawi Ataklti omg please make the video how to design primers

[@subhashreedhal4051]

Sir plz maximum parsimony and maximum likelihood Ka Video upload kariye

[@rabiyakhan7460]

how to find out which protein it is using a sequence

[@al-bairooniacademia]

Respected sir if I have only single sequence how I can align by mega x

[@uwimanaliberathe8566]

I want to save the results in colors but, it can not.what will i do?

[@joydeepmahata5579]

Love you sir

[@Blessingforyo]

hlo i am workiing on drug desine plz help and gaide what i do

[@roibailey6837]

Conducts basic and applied research in computational, mathematical, and theoretical problems in molecular biology and genetics, including genome analysis, sequence comparisons, sequence search methodologies, macromolecular structure, dynamics and interaction, and structure/function prediction
Establishes collaborative research projects in computational molecular biology with biologists, chemists, mathematicians, and computer scientists in NIH intramural laboratories, other government agencies, academia, and industry
Consults and advises governmental agencies and research laboratories in the application of computer-based analytical tools for studying molecular biology
Interacts with molecular biology groups to enhance wet-bench, laboratory-based research through the application of computational and theoretical approaches

[@chuskihouse8776]

what is the other significance of e value

[@alizahranmohd4095]

hellow. l follow the same procedure but when l click blast l do not get any progress.

[@shomusbiologyofficial]

Use modern version. Thise videos are old

[@panorama85]

Shomu vai namaste.
i cannot save file in FASTA formet. I have no suitable app for this. What can l do now?

[@shomusbiologyofficial]

Use notepad

[@saliougueye8671]

THANK U SIR

[@km2052]

thanks

[@radred1648]

Even tejender Pratap Rana Singh is watching you bro

[@craerae]

Bro are you happy with shomus explanation?

[@zebriahpatiencezhuwao9002]

Unfortunately with all the information you've provided sir, it's still not sensible for me to proceed with my project

[@shomusbiologyofficial]

These are old videos so the interface have changed now