7 Assign Taxonomy with DADA2

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  • čas přidán 6. 09. 2024
  • This video shows how to assign taxonomy with DADA2 in Chipster.
    DADA2 supported reference files:
    benjjneb.githu...
    DADA2 taxonomy:
    benjjneb.githu...
    Assign species recommendations:
    Robert. C. Edgar, (2018), Updating the 97% identity threshold for 16S ribosomal RNA OTUs. pubmed.ncbi.nl...
    Naive Bayesian classifier:
    Wang, Q. et. al. (2007). Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. www.ncbi.nlm.n...

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