Deep Learning for Protein Folding - Lecture 17 - MIT Deep Learning in Life Sciences (Spring 2021)

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  • čas přidán 7. 06. 2024
  • MIT 6.874/6.802/20.390/20.490/HST.506 Spring 2021 Prof. Manolis Kellis
    Guest lecturers: Bruno Correia, Jinbo Xu, Mohammed AlQuraishi
    Deep Learning in the Life Sciences / Computational Systems Biology
    Playlist: • MIT Deep Learning in L...
    Latest slides and course today: compbio.mit.edu/6874
    Spring 2021 slides and materials: mit6874.github.io/
    0:00 Introduction
    8:12 Protein surfaces
    9:45 Geometric deep learning
    13:08 Molecular surface interaction fingerprints
    24:42 De novo design of protein-protein interactions
    29:30 Protein structure prediction
    39:22 Coevolution analysis
    43:28 Previous supervised learning methods
    49:21 Deep learning
    56:54 Building a 3d structure from pairwise distance
    1:01:00 Ideas for improvement
    1:11:59 Algorithm space for protein structure prediction
    1:19:45 Decomposing algorithm space
    1:28:37 RGN
    1:35:02 RGN2
    1:38:53 Model performance
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