Domain, gene structure, motif analysis Genome wide study 2024 Part 08
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- čas přidán 27. 08. 2024
- In this video we will make the domain, gene structure and motif analysis of our protein family.
How to do the protein domain analysis?
How to do the gene structure?
How to do the motif analysis?
How to do the domain conserved analysis?
How to find the conserved region in the protein sequence?
How to find the motifs in the sequence file?
What is the difference between motif and domain?
How to rename file?
How to find description of the motif?
how to use InterPro?
How to find the exon, intron in the gene?
How to use GFF file?
how to align the sequence?
#genomewideanalysis
#gene
Dr sab thank you very much for this innovative lecture. I gained a lot of knowledge from this video. Thanks again. May Allah live you long.
Thanks for liking
I would like to ask if my p value is 0.000 with 1 degree of freedom, what to do and what does it mean?
That's great . Motif analysis can also be performed in TBtools.
yes, you can
Excellent
Thank you so much 😀
Hi
I hope you will be fine with good health.
I want to extract long interspersed nuclear elements from gff3 file and I don't understand which tool and files are used for input and output . Can you help me in this regard? It will be very appreciable if you give me your precious time.
Thanking in advance .
Student
You can use TBTools to extract your LINEs
@@genomewidestudy
Thanks for your response but my question is that how we can use TB tool ?
@@Hira555-wp4mf I think I have used the tbtools to construct the figure. You can follow the steps and make it
@@genomewidestudy Thanks 😇
@@Hira555-wp4mf you are welcome
Sir can we get the newick tree from omega clustal ?
yes you can