Zeiss LSM800 Airyscan confocal tutorial

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  • čas přidán 30. 07. 2024
  • This video covers the hardware and software for Newcastle University's Bioimaging Unit LSM800 confocal, including startup, shutdown, and operating the software. Details and bookmarks for sections below:
    Startup
    00:16 - System Startup
    01:52 - Using an Oil Immersion Objective
    02:50 - Starting Zen and a quick overview
    03:50 - Using the Oculars
    04:13 - Using the camera to check your sample
    Basic channel Setup
    05:00 - Setting up for confocal imaging with Smart Setup
    07:15 - Describing Tracks and Channels and manual adjustment of Imaging Setup
    08:00 - Line and Frame mode differences
    09:03 - Detectors on System
    09:35 - Fine tuning Imaging Setup manually
    11:14- Going Live and using the histogram
    11:54 - Using bidrectional scanning
    12:15 - Using Nyquist sampling and changing frame size in Acquisition Mode
    13:17 - Setting Gain and laser power using the histogram
    14:18 - Setting Gain and laser power using the Range indicator
    14:38 - 8 bit and 16 bit output
    15:05 - Setting gain and laser on a 2 channel Track
    15:38 - Taking a Snap Image
    16:10 - checking the image for fine tuning
    16:54 - Check focal planes for final image
    17:34 - Checking for bleedthrough within a multichannel Track
    18:40 - Improving Image Quality with dwell time
    20:00 - Improving Image Quality with Averaging
    Zed Stacks
    20:47 - Taking Zed Stacks using mark Centre
    22:01 - zed sampling frequency
    23:10 - Using Start Experiment
    23:30 - Viewing 3D images
    24:19 - Setting Zed Stack with First and Last
    Tiling and Multipositions
    25:05 - Tiles and Positions setup
    26:30 - Using confocal Zoom for overview
    26:45 - Taking a Confocal TileScan
    27:45 - Taking overview scans using Widefield Imaging
    30:15 - Setting Multiple positions from an Overview Scan
    31:19 - Checked zed positions for multiposition imaging with Verify Positions
    32:14 - Navigating through multiposition czi ifiles
    32:30 - Advanced Tiles setup for Preview Scans
    34:22 - Setting Support Points for tiled images
    36:09 - Focussing Strategy options
    Confocal and Airyscan imaging
    37:38 - Using Confocal Zoom to take cropped images
    38:30 - Nyquist confocal Imaging
    38:54 - Using Smart Setup to create Airyscan setup
    40:40 - comparing Airyscan to Confocal imaging
    41:19 - checking Airyscan alignment
    Timelapse with Mulitpositions
    41:50 - moving the stage via captured images to set up multipositional imaging
    42:56 - Setting multiposition, multitime imaging
    43:26 - Navigating through time series multiposition czi files
    43:56 - Setting incubation conditions
    Saving and Shutting down
    44:56 - Saving your images
    45:46 - Shutting down Zen
    46:02 - Copying data to server
    Hardware Shutdown
    47:05 - Shutting down the hardware
    47:22 - Cleaning oil immersion lenses after use

Komentáře • 2

  • @n-sh2014
    @n-sh2014 Před 2 lety

    Such a fabulous and informative tutorial video. Thanks a million!

  • @vasilikiskiada2332
    @vasilikiskiada2332 Před 9 měsíci

    Hello. Thank you for this detailed tutorial. I would like to perform imaging of a fluorochrome and on the same time record the transmitted light image. Is there a way to do that? Thank you.